Registration as a VAT payer

The obligation to register as a person liable to VAT arises if the supply of the transactions specified in subsection 3 of § 19¹ of the Value Added Tax Act, the place of supply of which is Estonia, exceeds 40,000 euros from the beginning of the year. An economic operator whose intra-Community acquisition of goods exceeds 10,000 euros as calculated from the beginning of a year is registered as liable to value added tax with limited liability. A parent undertaking and its subsidiaries can be registered as a value added tax group. For both registration and deletion from the register, an application must be submitted to the Estonian Tax and Customs Board.

 Useful links

Handbook “Registration as a VAT payer”

Registration at the initiative of the tax authority

If the taxable person has not submitted a registration application within the time limit laid down by law (does not submit the application at all or submits it late), the tax authority will register the person retroactively on its own initiative from the date on which the supply exceeded 40,000 euros and will notify the taxable person of the corresponding decision within three working days as of the date on which the decision was made (subsection 10 of § 20 of the VAT Act).

If a taxable person has submitted an application for registration and is also registered as a taxable person, but it becomes evident after registration that the application was submitted late and that the supply threshold was actually exceeded earlier, the tax authority will issue a new registration decision. The tax authority will repeal its original decision retroactively and the person will be registered with a new decision as of the date on which the taxable supply in the corresponding amount arose. In this case, the tax authority will also forward to the person the decision made on the registration of the person within three working days as of the date on which the decision is made (subsection 11 of § 20 of the VAT Act).

Last updated on 08.01.2025

Last updated: 20.02.2026

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